Proceedings of the American Academy of Arts and Sciences Series
- "On an Improvement in Boole's Calculus of Logic."
- Proceedings of the American Academy of Arts and Sciences 7 (1867), 250-261.
- "On the Natural Classification of Arguments."
- Proceedings of the American Academy of Arts and Sciences 7 (1867), 261-287.
- "On a New List of Categories."
- Proceedings of the American Academy of Arts and Sciences 7 (1867), 287-298.
- "Upon the Logic of Mathematics."
- Proceedings of the American Academy of Arts and Sciences 7 (1867), 402-412.
- "Upon Logical Comprehension and Extension."
- Proceedings of the American Academy of Arts and Sciences 7 (1867), 416-432.
Journal of Speculative Philosophy Cognition Series
- "Questions Concerning Certain Faculties Claimed for Man."
- Journal of Speculative Philosophy, 2 (1868), 103-114.
- "Some Consequences of Four Incapacities."
- Journal of Speculative Philosophy, 2 (1868), 140-157.
- "Grounds of Validity of the Laws of Logic: Further Consequences of Four Incapacities."
- Journal of Speculative Philosophy, 2 (1869), 193-208.
Illustrations of the Logic of Science
- "The Fixation of Belief."
- Popular Science Monthly 12 (November 1877), 1-15.
- "How to Make Our Ideas Clear."
- Popular Science Monthly 12 (January 1878), 286-302.
- "The Doctrine of Chances."
- Popular Science Monthly 12 (March 1878), 604-615.
- "The Probability of Induction."
- Popular Science Monthly 12 (April 1878), 705-718.
- "The Order of Nature."
- Popular Science Monthly 13 (June 1878), 203-217.
- "Deduction, Induction, and Hypothesis."
- Popular Science Monthly 13 (August 1878), 470-482.
- "Comment se fixe la croyance."
- Revue Philosophique de la France et de L'Étranger 6 (December 1878), 553-569.
- "Comment rendre nos idées claires."
- Revue Philosophique de la France et de L'Étranger 7 (January 1879), 39-57.
